PROJECT NAME
GOLD Project ID
Gp0001525  
Project Name
Herbaspirillum seropedicae Z67  
Other Names
  
Legacy ER Project ID
11427  
Legacy GOLD ID
Gi01013  
NCBI BioProject Name Herbaspirillum seropedicae
NCBI BioProject ID 15704
NCBI BioProject Accession
PRJNA15704  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Pedrosa FO
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2010-05-27
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Biotechnological
Root Nodulating Bacteria (RNB)
Sequencing Center
  
Collaborating Institute ANRT (France)
Funding Agency
  
Project Description
Root-associated nitrogen-fixing bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Herbaspirillum seropedicae Z67
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001525
Organism Name
Herbaspirillum seropedicae Z67  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Herbaspirillum  
Genus Synonyms
  
Species
Herbaspirillum seropedicae  
Subspecies
  
Species Synonyms
  
Strain
Z67  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 35892  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1706  
Exemplar Name
Herbaspirillum seropedicae  
Taxon DOI
10.1601/tx.1706  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 964
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Oxalobacteraceae  
NCBI Genus
Herbaspirillum  
NCBI Species
Herbaspirillum seropedicae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AJ238361
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Rice  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Plant root
Root nodule
Soil
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources
  

 

 

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