PROJECT NAME
GOLD Project ID
Gp0001260  
Project Name
Kordia algicida OT-1  
Other Names
  
Legacy ER Project ID
11156  
Legacy GOLD ID
Gi01417  
NCBI BioProject Name Kordia algicida OT-1
NCBI BioProject ID 19315
NCBI BioProject Accession
PRJNA19315  
NCBI Locus Tag
KAOT1  
NCBI BioSample Accession
SAMN02436147  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Environmental
Marine Microbial Initiative (MMI)
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute Korea Institute of Ocean Science and Technology (KIOST) (South Korea)
Funding Agency Gordon and Betty Moore Foundation Marine Microbiology Initiative (USA)
Project Description
OT-1 showed algicidal activity during an outbreak of red tide. (The publication reporting this strain was selected for Hot Off The Presses for Microbiology Today (SGM, UK). Important in interactions between algae and algicidal bacteria.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Information
Database
  
Genome Publications Journal of bacteriology 193(15):4031-2 Genome sequence of the algicidal bacterium Kordia algicida OT-1.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Kordia algicida OT-1
Analysis Projects Kordia algicida OT-1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001260
Organism Name
Kordia algicida OT-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Kordia  
Genus Synonyms
  
Species
Kordia algicida  
Subspecies
  
Species Synonyms
  
Strain
OT-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
KCTC 8814P  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8649  
Exemplar Name
Kordia algicida  
Taxon DOI
10.1601/tx.8649  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 391587
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Kordia  
NCBI Species
Kordia algicida  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY195836
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Marine
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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