PROJECT INFORMATION
GOLD Project ID
Gp0000747  
Project Name
Arabidopsis thaliana Columbia  
Other Names
  
Legacy ER Project ID
10645  
Legacy GOLD ID
Gc00041  
NCBI BioProject Name Arabidopsis thaliana
NCBI BioProject ID 13190
NCBI BioProject Accession PRJNA13190
NCBI Locus Tag
  
NCBI BioSample Accession
PI TIGR
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Ionna Pagani on 2010-10-27
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Model Organism
Sequencing Center ANRT (France)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
U.S. Department of Agriculture (France)
European Union (EU) (European Union)
Project Description
Arabidopsis thaliana legacy genome sequence  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Wikipedia
Database
  
Genome Publications Nature Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.
Other Publications
  
PROJECT COMPOSITION
Study Arabidopsis thaliana Columbia
Analysis Projects Arabidopsis thaliana Columbia
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
arge-insert bacterial artificial chromosome (BAC), phage (P1) and transformation-competent artificial chromosome (TAC) libraries  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
5  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000747
Organism Name
Arabidopsis thaliana Columbia  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
PLANTS-STREPTOPHYTA  
Genus
Arabidopsis  
Genus Synonyms
  
Species
Arabidopsis thaliana  
Subspecies
  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
Columbia  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 3702
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Viridiplantae  
NCBI Phylum
Streptophyta  
NCBI Class
  
NCBI Order
Brassicales  
NCBI Family
Brassicaceae  
NCBI Genus
Arabidopsis  
NCBI Species
Arabidopsis thaliana  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?