PROJECT INFORMATION
GOLD Project ID
Gp0000734  
Project Name
Pyrococcus abyssi GE5  
Other Names
  
Legacy ER Project ID
10633  
Legacy GOLD ID
Gc00053  
NCBI BioProject Name Pyrococcus abyssi GE5
NCBI BioProject ID 179
NCBI BioProject Accession PRJNA179
NCBI Locus Tag
PAB  
NCBI BioSample Accession SAMEA3283067
PI Poch O
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center CEA Genoscope (France)
Collaborating Institute
  
Funding Agency Centre National de la Recherche Scientifique (CNRS) (France)
National Institute for Agricultural Research (INRA) (France)
Project Description
Anaerobic hyperthermophilic archeon  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information ArchaeaWeb
Database
  
Genome Publications Genome research Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea.
Other Publications
  
PROJECT COMPOSITION
Study Pyrococcus abyssi GE5
Organism Pyrococcus abyssi GE5
Analysis Projects Pyrococcus abyssi GE5
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000734
Organism Name
Pyrococcus abyssi GE5  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Pyrococcus  
Genus Synonyms
  
Species
Pyrococcus abyssi  
Subspecies
  
Species Synonyms
  
Strain
GE5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272844
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Pyrococcus  
NCBI Species
Pyrococcus abyssi  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
67 - 103  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Deep sea
Metabolisms Sulfur respiration
Phenotypes Barophile
Energy Sources
  

 

 

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