PROJECT NAME
GOLD Project ID
Gp0000638  
Project Name
Mycobacterium bovis AF 2122/97  
Other Names
  
Legacy ER Project ID
10548  
Legacy GOLD ID
Gc00138  
NCBI BioProject Name Mycobacterium bovis AF2122/97
NCBI BioProject ID 89
NCBI BioProject Accession
PRJNA89  
NCBI Locus Tag
Mb  
NCBI BioSample Accession
SAMEA1705955  
PI Gordon SV
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Cattle Pathogen
Human Pathogen
Medical
Sequencing Center Institut Pasteur (France)
Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency Beowulf Genomics (United Kingdom)
Wellcome Trust Sanger Institute (United Kingdom)
Project Description
Causative agent of bovine tuberculosis.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The complete genome sequence of Mycobacterium bovis.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Mycobacterium bovis AF2122/97
Analysis Projects Mycobacterium bovis AF 2122/97
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1-4kb inserts  
Number Of Reads
94146  
Read Size
  
Vector
pUC18 and M13mp18 small  
GC Percent
66  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000638
Organism Name
Mycobacterium bovis AF 2122/97  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Mycobacterium  
Genus Synonyms
  
Species
Mycobacterium bovis  
Subspecies
  
Species Synonyms
  
Strain
AF 2122/97  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-935  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
3  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 233413
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Mycobacteriaceae  
NCBI Genus
Mycobacterium  
NCBI Species
Mycobacterium bovis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 501447
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Tuberculosis
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

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