| PROJECT INFORMATION | |
|---|---|
GOLD Project ID
|
Gp0000624
|
|
Project Name
|
Chloracidobacterium thermophilum B
|
|
Other Names
|
Candidatus Chloracidobacterium thermophilum B
|
|
Legacy ER Project ID
|
204
|
|
Legacy GOLD ID
|
Gi03605, Gc01980
|
| NCBI BioProject Name | Candidatus Chloracidobacterium thermophilum B |
|
NCBI BioProject ID
|
62457 |
|
NCBI BioProject Accession
|
PRJNA62457 |
|
NCBI Locus Tag
|
CABTHER
|
|
NCBI BioSample Accession
|
|
| PI | Amaya M. Garcia Costas |
| Added By |
Amaya M. Garcia Costas
on 2008-10-02 |
| Last Modified By |
Supratim Mukherjee
on 2017-03-10 |
| Project Comments |
|
|
Project Status
|
Complete and Published
|
|
Project Relevance
|
Biotechnological |
|
Sequencing Center
|
Pennsylvania State University
(USA)
|
|
Collaborating Institute
|
|
|
Funding Agency
|
National Science Foundation (NSF)
(USA)
|
|
Project Description
|
The genome of this species is extremely important to understanding the diversity and evolution of photosynthesis in Bacteria.
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
|
Project Information
|
Isolation |
|
Database
|
|
|
Genome Publications
|
Environmental microbiology
14(1):177-90
Complete genome of Candidatus Chloracidobacterium thermophilum, a chlorophyll-based photoheterotroph belonging to the phylum Acidobacteria.
|
|
Other Publications
|
|
| PROJECT COMPOSITION | |
| Study |
Chloracidobacterium thermophilum B |
| Organism |
Chloracidobacterium thermophilum B |
| Analysis Projects |
Chloracidobacterium thermophilum B |
| Number of Analysis Projects |
1 |
| Number of DAPs |
93
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
|
Finishing Goal
|
|
|
Sequencing Comments
|
|
|
Sequencing Technology
(MIGS-29)
|
|
|
Library Method
(MIGS-28)
|
|
|
Number Of Reads
|
|
|
Read Size
|
|
|
Vector
|
|
| GC Percent |
61
|
| Chromosome Count |
2
|
| Plasmid Count |
0
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0000624 |
| Organism Name |
Chloracidobacterium thermophilum B
|
| Other names (alias, synonyms, short names, common names) |
Candidatus Chloracidobacterium thermophilum B
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
ACIDOBACTERIA
|
| Genus |
Chloracidobacterium
|
| Genus Synonyms |
Candidatus Chloracidobacterium
|
| Species |
Chloracidobacterium thermophilum
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
B
|
| Strain Synonyms |
|
| Serovar-Biovar |
|
| Culture Collection ID |
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.26623
|
| Exemplar Name |
Chloracidobacterium thermophilum
|
| Taxon DOI |
10.1601/tx.26623
|
| Biosafety Level |
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
981222 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Acidobacteria
|
| NCBI Class |
Blastocatellia
|
| NCBI Order |
|
| NCBI Family |
|
| NCBI Genus |
Chloracidobacterium
|
| NCBI Species |
Chloracidobacterium thermophilum
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Environmental
|
| Ecosystem Category |
Aquatic
|
| Ecosystem Type |
Thermal springs
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
|
| Genbank 16S ID |
|
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Aerobe
|
| Cell Shape |
|
| Motility |
|
| Sporulation |
|
| Temperature Range |
Thermophile
|
| Temperature Optimum |
53
|
| Salinity |
|
| pH |
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram-
|
| Biotic Relationships |
|
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
|
| Diseases |
|
| Known Habitats |
|
| Metabolisms |
|
| Phenotypes |
|
| Energy Sources |
Photoheterotroph |
You are going to add the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the SP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Checking that this Sequencing Project can be made private:
Do you want to continue with this visibility change?
