PROJECT NAME
GOLD Project ID
Gp0000508  
Project Name
Cryptococcus neoformans var. neoformans JEC 21  
Other Names
  
Legacy ER Project ID
10438  
Legacy GOLD ID
Gc00247  
NCBI BioProject Name Cryptococcus neoformans var. neoformans JEC21
NCBI BioProject ID 13856
NCBI BioProject Accession
PRJNA13856  
NCBI Locus Tag
CN  
NCBI BioSample Accession
  
PI TIGR
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2011-02-07
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute Stanford University (USA)
Funding Agency National Institute of Allergy and Infectious Diseases (USA)
Project Description
WGS sequencing of strain JEC21 (serotype D)  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications "Science (New York, N.Y.)" The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Cryptococcus neoformans var neoformans JEC 21
Analysis Projects Cryptococcus neoformans var. neoformans JEC 21
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
2-3 kb, 3-4 kb, 8-12 kb, 25-40 kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
49  
Chromosome Count
14  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000508
Organism Name
Cryptococcus neoformans var. neoformans JEC 21  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Cryptococcus  
Genus Synonyms
  
Species
Cryptococcus neoformans  
Subspecies
  
Species Synonyms
  
Strain
JEC 21  
Strain Synonyms
  
Serovar-Biovar
neoformans  
Culture Collection ID
ATCC MYA-565  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 214684
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Tremellomycetes  
NCBI Order
Tremellales  
NCBI Family
Tremellaceae  
NCBI Genus
Filobasidiella  
NCBI Species
Cryptococcus neoformans  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 502433
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Cryptococcosis
Known Habitats Host
Soil
Metabolisms
  
Phenotypes Bipolar
Heterothallic
Pathogen
Energy Sources
  

 

 

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