PROJECT INFORMATION
GOLD Project ID
Gp0000454  
Project Name
Staphylococcus saprophyticus saprophyticus ATCC 15305  
Other Names
  
Legacy ER Project ID
10394  
Legacy GOLD ID
Gc00291  
NCBI BioProject Name Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
NCBI BioProject ID 15596
NCBI BioProject Accession PRJNA15596
NCBI Locus Tag
SSP  
NCBI BioSample Accession SAMD00061076
PI Hattori M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Alejandro Rodriguez Mojica on 2018-07-23
Project Comments
  
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Kitasato University (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Commensal Staphylococcal species that can cause acute urinary tract infections  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Isolation
Wikipedia
Entrez
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection.
Other Publications
  
PROJECT COMPOSITION
Study Staphylococcus saprophyticus saprophyticus ATCC 15305
Analysis Projects Staphylococcus saprophyticus saprophyticus ATCC 15305
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1-2 kb, 10 kb  
Number Of Reads
44160  
Read Size
  
Vector
  
GC Percent
33  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0000454
Organism Name
Staphylococcus saprophyticus saprophyticus ATCC 15305  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Staphylococcus  
Genus Synonyms
  
Species
Staphylococcus saprophyticus  
Subspecies
saprophyticus  
Species Synonyms
  
Strain
ATCC 15305  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 15305  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5268  
Exemplar Name
Staphylococcus saprophyticus  
Taxon DOI
10.1601/tx.11051  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 342451
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Staphylococcaceae  
NCBI Genus
Staphylococcus  
NCBI Species
Staphylococcus saprophyticus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Excretory system  
Ecosystem Subtype
Urethra  
Specific Ecosystem
Urine  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 681611
Genbank 16S ID D83371
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Clusters
Diseases Urinary infection
Known Habitats Host
Human skin
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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