PROJECT INFORMATION
GOLD Project ID
Gp0000451  
Project Name
Dehalococcoides mccartyi CBDB1  
Other Names
  
Legacy ER Project ID
10392  
Legacy GOLD ID
Gc00293  
NCBI BioProject Name Dehalococcoides sp. CBDB1
NCBI BioProject ID 15604
NCBI BioProject Accession PRJNA15604
NCBI Locus Tag
cbdb  
NCBI BioSample Accession SAMEA3138187
PI Adrian L
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Biotechnological
Bioremediation
Ecological
Sequencing Center Max Planck Institute (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Anaerobic organism capable of dechlorinating a wide variety of environmental pollutants  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Isolation
Database
  
Genome Publications Nature biotechnology Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1.
Other Publications
  
PROJECT COMPOSITION
Study Dehalococcoides sp. CBDB1
Analysis Projects Dehalococcoides mccartyi CBDB1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000451
Organism Name
Dehalococcoides mccartyi CBDB1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROFLEXI  
Genus
Dehalococcoides  
Genus Synonyms
  
Species
Dehalococcoides mccartyi  
Subspecies
  
Species Synonyms
  
Strain
CBDB1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 255470
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chloroflexi  
NCBI Class
Dehalococcoidia  
NCBI Order
Dehalococcoidales  
NCBI Family
Dehalococcoidaceae  
NCBI Genus
Dehalococcoides  
NCBI Species
Dehalococcoides mccartyi  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lotic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Sediment
Aquatic
Fresh water
Groundwater
Metabolisms Dechlorinates Tetrachloroethene
Phenotypes
  
Energy Sources Chemolithotroph

 

 

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