PROJECT INFORMATION
GOLD Project ID
Gp0000422  
Project Name
Synechococcus elongatus PCC 7942  
Other Names
  
Legacy ER Project ID
10367  
Legacy GOLD ID
Gc00319  
NCBI BioProject Name Synechococcus elongatus PCC 7942
NCBI BioProject ID 10645
NCBI BioProject Accession PRJNA10645
NCBI Locus Tag
Synpcc7942  
NCBI BioSample Accession SAMN02598254
PI Golden, Susan
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Ocean carbon cycle
Environmental
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Texas A and M University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Freshwater cyanobacteria that is extensively studied due to circadian rhythms.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
Entrez
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Synechococcus elongatus PCC7942
Analysis Projects Synechococcus elongatus PCC 7942
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000422
Organism Name
Synechococcus elongatus PCC 7942  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Synechococcus  
Genus Synonyms
  
Species
Synechococcus elongatus  
Subspecies
  
Species Synonyms
  
Strain
PCC 7942  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
PCC 7942  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1140
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Synechococcales  
NCBI Family
Synechococcaceae  
NCBI Genus
Synechococcus  
NCBI Species
Synechococcus elongatus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 109929
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases None
Known Habitats Aquatic
Fresh water
Metabolisms Carbon fixation
Phenotypes
  
Energy Sources Photosynthetic
Photoautotroph

 

 

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