PROJECT NAME
GOLD Project ID
Gp0000395  
Project Name
Rhizobium etli CFN 42, DSM 11541  
Other Names
  
Legacy ER Project ID
10344  
Legacy GOLD ID
Gi00503, Gc00342  
NCBI BioProject Name Rhizobium etli CFN 42
NCBI BioProject ID 13932
NCBI BioProject Accession
PRJNA13932  
NCBI Locus Tag
RHE  
NCBI BioSample Accession
SAMN02603106  
PI Brom S
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Biotechnological
Root Nodulating Bacteria (RNB)
Sequencing Center
  
Collaborating Institute National Autonomous University of Mexico (Mexico)
Funding Agency
  
Project Description
Nitrogen-fixing symbiotic bacteria  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Rhizobium etli CFN 42, DSM 11541
Analysis Projects Rhizobium etli CFN 42, DSM 11541
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
117596  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
1  
Plasmid Count
6  
ORGANISM NAME
GOLD Organism ID Go0000395
Organism Name
Rhizobium etli CFN 42, DSM 11541  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rhizobium  
Genus Synonyms
  
Species
Rhizobium etli  
Subspecies
  
Species Synonyms
  
Strain
CFN 42, DSM 11541  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 51251  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1282  
Exemplar Name
Rhizobium etli  
Taxon DOI
10.1601/tx.1282  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 347834
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Rhizobiaceae  
NCBI Genus
Rhizobium  
NCBI Species
Rhizobium etli  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 121591
Genbank 16S ID U28916
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Phaseolus vulgaris  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Plant root
Root nodule
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources
  

 

 

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