PROJECT NAME
GOLD Project ID
Gp0000308  
Project Name
Listeria welshimeri sv. 6b, SLCC5334  
Other Names
  
Legacy ER Project ID
10268  
Legacy GOLD ID
Gi00334, Gc00418  
NCBI BioProject Name Listeria welshimeri serovar 6b str. SLCC5334
NCBI BioProject ID 13443
NCBI BioProject Accession
PRJNA13443  
NCBI Locus Tag
lwe  
NCBI BioSample Accession
SAMEA3138260  
PI Trinad Chakraborty
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center
  
Collaborating Institute University of Giessen
University of Wuerzburg (Germany)
Funding Agency Federal Ministry of Education and Research (BMBF) (Germany)
Project Description
Nonpathogenic serovar 6b strain  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Pathogenesis
About-Listeria
Database
  
Genome Publications Journal of bacteriology Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Listeria welshimeri sv 6b, SLCC5334
Analysis Projects Listeria welshimeri sv. 6b, SLCC5334
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000308
Organism Name
Listeria welshimeri sv. 6b, SLCC5334  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Listeria  
Genus Synonyms
  
Species
Listeria welshimeri  
Subspecies
  
Species Synonyms
  
Strain
SLCC5334  
Strain Synonyms
  
Serovar-Biovar
6b  
Culture Collection ID
ATCC 35897  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5104  
Exemplar Name
Listeria welshimeri  
Taxon DOI
10.1601/tx.5104  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 386043
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Listeriaceae  
NCBI Genus
Listeria  
NCBI Species
Listeria welshimeri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 14895
Genbank 16S ID X98532
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Singles
Diseases None
Known Habitats Food
Fresh water
Host
Soil
Metabolisms
  
Phenotypes Non-Pathogen
Energy Sources Chemoorganotroph

 

 

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