PROJECT NAME
GOLD Project ID
Gp0000203  
Project Name
Ruminiclostridium thermocellum ATCC 27405  
Other Names
Clostridium thermocellum ATCC 27405  
Legacy ER Project ID
10175  
Legacy GOLD ID
Gi00164, Gc00510  
NCBI BioProject Name Clostridium thermocellum ATCC 27405
NCBI BioProject ID 314
NCBI BioProject Accession PRJNA314
NCBI Locus Tag
Cthe  
NCBI BioSample Accession SAMN02598481
PI Wu, David
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Supratim Mukherjee on 2017-03-07
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Energy production
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Rochester
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Degrader of crystalline cellulose.  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Wikipedia
Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Clostridium thermocellum ATCC 27405
Analysis Projects Ruminiclostridium thermocellum ATCC 27405
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
39  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0018904
Organism Name
Ruminiclostridium thermocellum ATCC 27405  
Other names (alias, synonyms, short names, common names)
Clostridium thermocellum ATCC 27405  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Ruminiclostridium  
Genus Synonyms
Clostridium  
Species
Ruminiclostridium thermocellum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 27405  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 27405  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.4037  
Exemplar Name
Clostridium thermocellum  
Taxon DOI
10.1601/tx.4037  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 203119
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Ruminococcaceae  
NCBI Genus
Ruminiclostridium  
NCBI Species
Ruminiclostridium thermocellum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 40680
Genbank 16S ID L09173
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Temperature Optimum
60C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Chains
Diseases None
Known Habitats Intestinal tract
Aquatic
Soil
Host
Fresh water
Metabolisms Ethanogenic
Cellulose degrader
Phenotypes Non-Pathogen
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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