PROJECT INFORMATION
GOLD Project ID
Gp0000198  
Project Name
Rhodobacter sphaeroides ATCC 17029  
Other Names
  
Legacy ER Project ID
10170  
Legacy GOLD ID
Gi01030, Gc00515  
NCBI BioProject Name Rhodobacter sphaeroides ATCC 17029
NCBI BioProject ID 15754
NCBI BioProject Accession PRJNA15754
NCBI Locus Tag
Rsph17029  
NCBI BioSample Accession SAMN02598340
PI samuel kaplan
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Biotechnological
Energy production
Bioremediation
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Metabolically diverse phototrophic bacterium  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II.
Other Publications
  
PROJECT COMPOSITION
Study Rhodobacter sphaeroides Strains
Analysis Projects Rhodobacter sphaeroides ATCC 17029
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
69  
Chromosome Count
2  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000198
Organism Name
Rhodobacter sphaeroides ATCC 17029  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rhodobacter  
Genus Synonyms
  
Species
Rhodobacter sphaeroides  
Subspecies
  
Species Synonyms
  
Strain
ATCC 17029  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 17029  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 349101
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Rhodobacter  
NCBI Species
Rhodobacter sphaeroides  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 99113
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25 - 35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes Non-Pathogen
Energy Sources Photosynthetic

 

 

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