PROJECT NAME
GOLD Project ID
Gp0000124  
Project Name
Bacteroides vulgatus ATCC 8482  
Other Names
  
Legacy ER Project ID
10101  
Legacy GOLD ID
Gi00072, Gc00584  
NCBI BioProject Name Bacteroides vulgatus ATCC 8482
NCBI BioProject ID 13378
NCBI BioProject Accession
PRJNA13378  
NCBI Locus Tag
BVU  
NCBI BioSample Accession
SAMN02604309  
PI Human Gut Community Users
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Comparative analysis
Human Gut Microbiome Initiative (HGMI)
Human Pathogen
Medical
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
Dominant member of mammalian intestinal microflora  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications PLoS biology Evolution of symbiotic bacteria in the distal human intestine.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Bacteroides vulgatus ATCC 8482
Analysis Projects Bacteroides vulgatus ATCC 8482
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
5 kb, 40 kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
42  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000124
Organism Name
Bacteroides vulgatus ATCC 8482  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Bacteroides  
Genus Synonyms
  
Species
Bacteroides vulgatus  
Subspecies
  
Species Synonyms
  
Strain
ATCC 8482  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 8482  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7994  
Exemplar Name
Bacteroides vulgatus  
Taxon DOI
10.1601/tx.7994  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 435590
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Bacteroidia  
NCBI Order
Bacteroidales  
NCBI Family
Bacteroidaceae  
NCBI Genus
Bacteroides  
NCBI Species
Bacteroides vulgatus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 38333
Genbank 16S ID M58762
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Opportunistic peritoneal disease
Known Habitats Feces
Gastrointestinal tract
Host
Intestinal tract
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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