PROJECT NAME
GOLD Project ID
Gp0009755  
Project Name
Caldilinea aerophila STL-6-O1, DSM 14535  
Other Names
  
Legacy ER Project ID
18918  
Legacy GOLD ID
Gi08818  
NCBI BioProject Name Caldilinea aerophila DSM 14535 = NBRC 104270
NCBI BioProject ID 82929
NCBI BioProject Accession PRJNA82929
NCBI Locus Tag
Calae  
NCBI BioSample Accession SAMN00707155
PI Jonathan Eisen
Added By Ionna Pagani on 2011-02-09
Last Modified By Supratim Mukherjee on 2017-06-27
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Tree of Life
GEBA
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
University of California, Davis (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project.  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Analysis Projects Caldilinea aerophila STL-6-O1, DSM 14535
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
59  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0009755
Organism Name
Caldilinea aerophila STL-6-O1, DSM 14535  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROFLEXI  
Genus
Caldilinea  
Genus Synonyms
  
Species
Caldilinea aerophila  
Subspecies
  
Species Synonyms
  
Strain
STL-6-O1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 14535  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.580  
Exemplar Name
Caldilinea aerophila  
Taxon DOI
10.1601/tx.580  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 926550
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chloroflexi  
NCBI Class
Caldilineae  
NCBI Order
Caldilineales  
NCBI Family
Caldilineaceae  
NCBI Genus
Caldilinea  
NCBI Species
Caldilinea aerophila  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB067647
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
55  
Salinity
  
pH
7.5 - 8.0  
Cell Diameter
  
Cell Length
0.7 - 0.8 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Hot spring
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?