PROJECT INFORMATION
GOLD Project ID
Gp0093195  
Project Name
Thermobifida fusca NBRC 14071, JCM 3263  
Other Names
  
Legacy ER Project ID
73312  
Legacy GOLD ID
Gi0073312  
NCBI BioProject Name Thermobifida fusca NBRC 14071 = JCM 3263
NCBI BioProject ID 243798
NCBI BioProject Accession PRJDB963
NCBI Locus Tag
JCM3263  
NCBI BioSample Accession SAMD00016950
PI
Added By JGI automated process on 2014-04-25
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Tokyo (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
For the promotion of various studies, we perform genome sequencing of the important 300 microbial organisms to human and the environment.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome sequencing of Thermobifida fusca JCM 3263
Organism Thermobifida fusca 190Th
Analysis Projects Thermobifida fusca NBRC 14071, JCM 3263
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0093195
Organism Name
Thermobifida fusca 190Th  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Thermobifida  
Genus Synonyms
  
Species
Thermobifida fusca  
Subspecies
  
Species Synonyms
  
Strain
190Th  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 3263  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7569  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1223522
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Streptosporangiales  
NCBI Family
Nocardiopsaceae  
NCBI Genus
Thermobifida  
NCBI Species
Thermobifida fusca  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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