PROJECT INFORMATION
GOLD Project ID
Gp0092911  
Project Name
Weissella ceti WS08  
Other Names
  
Legacy ER Project ID
73028  
Legacy GOLD ID
Gi0073028, Gc0073028  
NCBI BioProject Name Weissella ceti strain:WS08
NCBI BioProject ID 243375
NCBI BioProject Accession PRJNA243375
NCBI Locus Tag
WS08  
NCBI BioSample Accession
PI Figueiredo, Henrique
Added By JGI automated process on 2014-04-25
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Pathogen
Sequencing Center Federal University of Minas Gerais (Brazil)
Collaborating Institute
  
Funding Agency
  
Project Description
Weissella ceti is a Gram-positive non-motile bacterium that is an emerging pathogen affecting rainbow trout, Onchorhynchus mykiss (Walbaum), farms. Outbreaks are characterized by acute haemorrhagic septicaemia and high mortality rates.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Fish pathogen genome projects - Aquacen, Brazil
Organism Weissella ceti WS08
Analysis Projects Weissella ceti WS08
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0092911
Organism Name
Weissella ceti WS08  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Weissella  
Genus Synonyms
  
Species
Weissella ceti  
Subspecies
  
Species Synonyms
  
Strain
WS08  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 759620
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Leuconostocaceae  
NCBI Genus
Weissella  
NCBI Species
Weissella ceti  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
Nonmotile  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Fish
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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