PROJECT INFORMATION
GOLD Project ID
Gp0091942  
Project Name
Armatimonas rosea YO-36  
Other Names
  
Legacy ER Project ID
72653  
Legacy GOLD ID
Gi0072653  
NCBI BioProject Name Armatimonas rosea strain:NBRC 105658
NCBI BioProject ID 242921
NCBI BioProject Accession PRJDB1665
NCBI Locus Tag
ARMRO  
NCBI BioSample Accession
PI
Added By JGI automated process on 2014-04-15
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance Industrial
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Armatimonas rosea is a representing organism of a novel phylum 'Armatimonadetes'. We determined genome sequence of Armatimonas rosea to elucidate feature of this group of bacteria.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Armatimonas rosea NBRC 105658 genome sequencing project
Organism Armatimonas rosea YO-36
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0005824
Organism Name
Armatimonas rosea YO-36  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ARMATIMONADETES (OP10)  
Genus
Armatimonas  
Genus Synonyms
  
Species
Armatimonas rosea  
Subspecies
  
Species Synonyms
  
Strain
YO-36  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 105658  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.21827  
Exemplar Name
Armatimonas rosea  
Taxon DOI
10.1601/tx.21827  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 685828
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Armatimonadetes  
NCBI Class
Armatimonadia  
NCBI Order
Armatimonadales  
NCBI Family
Armatimonadaceae  
NCBI Genus
Armatimonas  
NCBI Species
Armatimonas rosea  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
30 - 35  
Salinity
  
pH
6.5  
Cell Diameter
  
Cell Length
  
Color
Pink  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Host
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources Chemoheterotroph

 

 

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