PROJECT INFORMATION
GOLD Project ID
Gp0091497  
Project Name
Thalassobacter sp. 16PALIMAR09  
Other Names
  
Legacy ER Project ID
72573  
Legacy GOLD ID
Gi0072573  
NCBI BioProject Name Thalassobacter sp. 16PALIMAR09
NCBI BioProject ID 242388
NCBI BioProject Accession PRJNA242388
NCBI Locus Tag
PM04  
NCBI BioSample Accession SAMN02693504
PI
Added By JGI automated process on 2014-04-02
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of the Balearic Islands (Spain)
Collaborating Institute
  
Funding Agency
  
Project Description
Thalassobacter sp. 16PALIMAR09 is a member of the Roseobacter clade that was isolated without xenobiotic pressure from a coastal-water sample from Palma de Mallorca harbor (Mallorca Island, Spain) on March 2009. Phylogenetically, its closest relative is the Thalassobacter stenotrophicus type-strain (99.79% nucleotide identity at 16S rRNA gene).  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequences of Thalassobacter Strains 1CONIMAR09 and 16PALIMAR09, Two Members of the Roseobacter Lineage Isolated from Coastal Areas of the Mediterranean Sea around Mallorca Island.
Other Publications
  
PROJECT COMPOSITION
Study Thalassobacter sp. 16PALIMAR09 Genome sequencing
Organism Thalassobacter sp. 16PALIMAR09
Analysis Projects Thalassobacter sp. 16PALIMAR09
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0091497
Organism Name
Thalassobacter sp. 16PALIMAR09  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Thalassobacter  
Genus Synonyms
  
Species
Thalassobacter sp. 16PALIMAR09  
Subspecies
  
Species Synonyms
  
Strain
16PALIMAR09  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1225651
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Thalassobacter  
NCBI Species
Thalassobacter sp. 16PALIMAR09  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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