PROJECT INFORMATION
GOLD Project ID
Gp0087591  
Project Name
Pseudomonas corrugata CFBP 5454  
Other Names
  
Legacy ER Project ID
70632  
Legacy GOLD ID
Gi0070632  
NCBI BioProject Name Pseudomonas corrugata CFBP 5454
NCBI BioProject ID 196427
NCBI BioProject Accession PRJNA196427
NCBI Locus Tag
K659  
NCBI BioSample Accession SAMN02641555
PI
Added By JGI automated process on 2014-02-14
Last Modified By JGI automated process on 2014-10-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Industrial
Sequencing Center Science and Technology Park of Sicily (PSTS)
Collaborating Institute
  
Funding Agency
  
Project Description
De novo genome assembly of Pseudomonas corrugata, a bacteria with agricultural and biotecnological relevance. The genome sequence will be useful for future exploitation for bioactive molecules and biopolymer production.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Pseudomonas corrugata CFBP 5454
Organism Pseudomonas corrugata CFBP 5454
Analysis Projects Pseudomonas corrugata CFBP 5454
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0087591
Organism Name
Pseudomonas corrugata CFBP 5454  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas corrugata  
Subspecies
  
Species Synonyms
  
Strain
CFBP 5454  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1316927
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas corrugata  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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