PROJECT INFORMATION
GOLD Project ID
Gp0007828  
Project Name
Streptococcus mutans 5SM3  
Other Names
  
Legacy ER Project ID
17332  
Legacy GOLD ID
Gi07056  
NCBI BioProject Name Streptococcus mutans 5SM3
NCBI BioProject ID 49779
NCBI BioProject Accession PRJNA49779
NCBI Locus Tag
SMU50  
NCBI BioSample Accession SAMN02428985
PI
Added By Ionna Pagani on 2010-06-22
Last Modified By JGI automated process on 2014-10-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Human Pathogen
Medical
Sequencing Center Cornell University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Streptococcus mutans 5SM3 genome sequencing project.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Streptococcus mutans 5SM3
Organism Streptococcus mutans 5SM3
Analysis Projects Streptococcus mutans 5SM3
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007828
Organism Name
Streptococcus mutans 5SM3  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus mutans  
Subspecies
  
Species Synonyms
  
Strain
5SM3  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 857142
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus mutans  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Oral  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Chains
Diseases Endocarditis
Dental caries
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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