PROJECT INFORMATION
GOLD Project ID
Gp0007703  
Project Name
Methanobrevibacter millerae SM9  
Other Names
  
Legacy ER Project ID
1018  
Legacy GOLD ID
Gi06992  
NCBI BioProject Name Methanobrevibacter millerae SM9
NCBI BioProject ID 49589
NCBI BioProject Accession PRJNA49589
NCBI Locus Tag
SM9  
NCBI BioSample Accession SAMN03438115
PI
Added By Ionna Pagani on 2010-06-11
Last Modified By Hema Katta on 2019-01-04
Project Comments
  
Project Status
Complete and Published  
Project Relevance Bioenergy
Biotechnological
Sequencing Center Pastoral Greenhouse Gas Research Consortium (PGgRc)
Collaborating Institute
  
Funding Agency
  
Project Description
This genome will be used to further understanding of ruminal methanogenesis.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences The complete genome sequence of the rumen methanogen Methanobrevibacter millerae SM9.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Methanobrevibacter millerae SM9
Organism Methanobrevibacter millerae SM9
Analysis Projects Methanobrevibacter millerae SM9
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007703
Organism Name
Methanobrevibacter millerae SM9  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOBACTERIA  
Genus
Methanobrevibacter  
Genus Synonyms
  
Species
Methanobrevibacter millerae  
Subspecies
  
Species Synonyms
  
Strain
SM9  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 230361
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanobacteria  
NCBI Order
Methanobacteriales  
NCBI Family
Methanobacteriaceae  
NCBI Genus
Methanobrevibacter  
NCBI Species
Methanobrevibacter millerae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Foregut  
Specific Ecosystem
Rumen  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Irregular colonies
Chains
Diseases None
Known Habitats Host
Metabolisms Methanogen
Phenotypes
  
Energy Sources Lithotroph

 

 

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