| PROJECT INFORMATION | |
|---|---|
GOLD Project ID
|
Gp0007166
|
|
Project Name
|
Natrinema gari JCM 14663
|
|
Other Names
|
|
|
Legacy ER Project ID
|
16700
|
|
Legacy GOLD ID
|
Gi06174
|
| NCBI BioProject Name |
|
|
NCBI BioProject ID
|
|
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NCBI BioProject Accession
|
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NCBI Locus Tag
|
|
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NCBI BioSample Accession
|
|
| PI | Marc T. Facciotti |
| Added By |
Nikos Kyrpides
on 2010-02-15 |
| Last Modified By |
JGI automated process
on 2014-05-20 |
| Project Comments |
|
|
Project Status
|
incomplete
|
|
Project Relevance
|
Tree of Life Biotechnological |
|
Sequencing Center
|
University of California, Davis
(USA)
|
|
Collaborating Institute
|
|
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Funding Agency
|
National Science Foundation (NSF)
(USA)
|
|
Project Description
|
phylogenomics of halophilic archaea
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
|
Project Information
|
Isolation |
|
Database
|
|
|
Genome Publications
|
|
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Other Publications
|
|
| PROJECT COMPOSITION | |
| Study |
Natrinema gari JCM 14663 |
| Organism |
Natrinema gari JCM 14663 |
| Analysis Projects |
|
| Number of Analysis Projects |
0 |
| Number of DAPs |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
DNA Received |
| Sequencing Quality (MIGS-31) |
|
|
Finishing Goal
|
|
|
Sequencing Comments
|
|
|
Sequencing Technology
(MIGS-29)
|
|
|
Library Method
(MIGS-28)
|
|
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Number Of Reads
|
|
|
Read Size
|
|
|
Vector
|
|
| GC Percent |
65
|
| Chromosome Count |
|
| Plasmid Count |
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0036940 |
| Organism Name |
Natrinema gari JCM 14663
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
ARCHAEAL
|
| Phylogeny |
EURYARCHAEOTA-HALOBACTERIA
|
| Genus |
Natrinema
|
| Genus Synonyms |
|
| Species |
Natrinema gari
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
JCM 14663
|
| Strain Synonyms |
|
| Serovar-Biovar |
|
| Culture Collection ID |
JCM 14663
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.13465
|
| Exemplar Name |
Natrinema gari
|
| Taxon DOI |
10.1601/tx.13465
|
| Biosafety Level |
1
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
1230459 |
| NCBI Superkingdom |
Archaea
|
| NCBI Kingdom |
|
| NCBI Phylum |
Euryarchaeota
|
| NCBI Class |
Halobacteria
|
| NCBI Order |
Natrialbales
|
| NCBI Family |
Natrialbaceae
|
| NCBI Genus |
Natrinema
|
| NCBI Species |
Natrinema gari
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Engineered
|
| Ecosystem Category |
Food production
|
| Ecosystem Type |
Unclassified
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
|
| Genbank 16S ID |
AB289741 |
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Aerobe
|
| Cell Shape |
Rod-shaped
|
| Motility |
|
| Sporulation |
|
| Temperature Range |
Mesophile
|
| Temperature Optimum |
37 - 40
|
| Salinity |
Halophile
|
| pH |
6.0 - 6.5
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram-
|
| Biotic Relationships |
|
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
Clusters |
| Diseases |
None |
| Known Habitats |
Host |
| Metabolisms |
|
| Phenotypes |
|
| Energy Sources |
Chemoorganotroph |
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