PROJECT INFORMATION | |
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GOLD Project ID
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Gp0007166
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Project Name
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Natrinema gari JCM 14663
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Other Names
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Legacy ER Project ID
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16700
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Legacy GOLD ID
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Gi06174
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NCBI BioProject Name |
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NCBI BioProject ID
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NCBI BioProject Accession
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NCBI Locus Tag
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NCBI BioSample Accession
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PI | Marc T. Facciotti |
Added By |
Nikos Kyrpides
on 2010-02-15 |
Last Modified By |
JGI automated process
on 2014-05-20 |
Project Comments |
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Project Status
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incomplete
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Project Relevance
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Tree of Life Biotechnological |
Sequencing Center
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University of California, Davis
(USA)
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Collaborating Institute
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Funding Agency
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National Science Foundation (NSF)
(USA)
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Project Description
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phylogenomics of halophilic archaea
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
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EXTERNAL PROJECT LINKS | |
Project Information
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Isolation |
Database
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Genome Publications
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Other Publications
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PROJECT COMPOSITION | |
Study |
Natrinema gari JCM 14663 |
Organism |
Natrinema gari JCM 14663 |
Analysis Projects |
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Number of Analysis Projects |
0 |
Number of DAPs |
0
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SEQUENCING INFORMATION | |
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Sequencing Status
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DNA Received |
Sequencing Quality (MIGS-31) |
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Finishing Goal
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Sequencing Comments
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Sequencing Technology
(MIGS-29)
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Library Method
(MIGS-28)
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Number Of Reads
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Read Size
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Vector
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GC Percent |
65
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Chromosome Count |
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Plasmid Count |
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ORGANISM NAME | |
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GOLD Organism ID |
Go0036940 |
Organism Name |
Natrinema gari JCM 14663
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Other names (alias, synonyms, short names, common names) |
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Organism Domain |
ARCHAEAL
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Phylogeny |
EURYARCHAEOTA-HALOBACTERIA
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Genus |
Natrinema
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Genus Synonyms |
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Species |
Natrinema gari
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Subspecies |
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Species Synonyms |
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Strain |
JCM 14663
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Strain Synonyms |
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Serovar-Biovar |
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Culture Collection ID |
JCM 14663
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Type Strain |
Yes
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Exemplar DOI |
10.1601/ex.13465
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Exemplar Name |
Natrinema gari
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Taxon DOI |
10.1601/tx.13465
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Biosafety Level |
1
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Organism Comments |
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Cultured |
Yes
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Culture Type |
Isolate
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Organism Type |
Natural
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Uncultured Type |
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Commercial Strain |
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Commercial Strain Comments |
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ORGANISM TAXONOMY
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NCBI Taxonomy ID |
1230459 |
NCBI Superkingdom |
Archaea
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NCBI Kingdom |
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NCBI Phylum |
Euryarchaeota
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NCBI Class |
Halobacteria
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NCBI Order |
Natrialbales
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NCBI Family |
Natrialbaceae
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NCBI Genus |
Natrinema
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NCBI Species |
Natrinema gari
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ISOLATION CLASSIFICATION | |
Ecosystem |
Engineered
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Ecosystem Category |
Food production
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Ecosystem Type |
Unclassified
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Ecosystem Subtype |
Unclassified
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Specific Ecosystem |
Unclassified
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ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
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Genbank 16S ID |
AB289741 |
GENERAL PROPERTIES | |
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Oxygen Requirement |
Aerobe
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Cell Shape |
Rod-shaped
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Motility |
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Sporulation |
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Temperature Range |
Mesophile
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Temperature Optimum |
37 - 40
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Salinity |
Halophile
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pH |
6.0 - 6.5
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Cell Diameter |
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Cell Length |
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Color |
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Gram Staining |
Gram-
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Biotic Relationships |
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Symbiotic Physical Interaction |
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Symbiotic Relationship |
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Symbiont Name |
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Symbiont Taxon ID |
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Cell Arrangements |
Clusters |
Diseases |
None |
Known Habitats |
Host |
Metabolisms |
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Phenotypes |
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Energy Sources |
Chemoorganotroph |
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