PROJECT INFORMATION
GOLD Project ID
Gp0006689  
Project Name
Methylophaga thalassica S1  
Other Names
  
Legacy ER Project ID
11491  
Legacy GOLD ID
Gi00372  
NCBI BioProject Name Methylophaga thalassica S1
NCBI BioProject ID 13471
NCBI BioProject Accession PRJNA13471
NCBI Locus Tag
  
NCBI BioSample Accession
PI IG
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2008-11-03
Project Comments
  
Project Status
incomplete  
Project Relevance Biotechnological
Sequencing Center Integrated Genomics (USA)
Collaborating Institute
  
Funding Agency Integrated Genomics (USA)
Project Description
Halophilic methylotroph  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Methylophaga thalassica S1
Organism Methylophaga thalassica S1
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006689
Organism Name
Methylophaga thalassica S1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Methylophaga  
Genus Synonyms
  
Species
Methylophaga thalassica  
Subspecies
  
Species Synonyms
  
Strain
S1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 40223
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Thiotrichales  
NCBI Family
Piscirickettsiaceae  
NCBI Genus
Methylophaga  
NCBI Species
Methylophaga thalassica  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Methylotroph

 

 

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