PROJECT INFORMATION
GOLD Project ID
Gp0006525  
Project Name
Hymenobacter roseosalivarius AA-718, DSM 11622  
Other Names
  
Legacy ER Project ID
39  
Legacy GOLD ID
Gi03026  
NCBI BioProject Name Hymenobacter roseosalivarius DSM 11622
NCBI BioProject ID 38115
NCBI BioProject Accession PRJNA38115
NCBI Locus Tag
Hros  
NCBI BioSample Accession SAMN00120144
PI Jonathan Eisen
Added By Nikos Kyrpides on 2008-02-06
Last Modified By Hema Katta on 2019-03-09
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Tree of Life
GEBA
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Leibniz Institute (Germany)
Project Description
Hymenobacter roseosalivarius DSM 11622 Genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications Syst. Appl. Microbiol. 21(3):374-383 Hymenobacter roseosalivarius gen. nov., sp. nov. from continental Antartica soils and sandstone: bacteria of the Cytophaga/Flavobacterium/Bacteroides line of phylogenetic descent.
Other Publications
  
PROJECT COMPOSITION
Study A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Organism Hymenobacter roseosalivarius AA-718, DSM 11622
Analysis Projects Hymenobacter roseosalivarius AA-718, DSM 11622
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
454 GS FLX Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006525
Organism Name
Hymenobacter roseosalivarius AA-718, DSM 11622  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Hymenobacter  
Genus Synonyms
  
Species
Hymenobacter roseosalivarius  
Subspecies
  
Species Synonyms
  
Strain
AA-718, DSM 11622  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 11622  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8305  
Exemplar Name
Hymenobacter roseosalivarius  
Taxon DOI
10.1601/tx.8305  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 645990
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Hymenobacteraceae  
NCBI Genus
Hymenobacter  
NCBI Species
Hymenobacter roseosalivarius  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID Y18833
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Psychrophile  
Temperature Optimum
9  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Sand
Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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