PROJECT INFORMATION
GOLD Project ID
Gp0043190  
Project Name
Bacillus azotoformans MEV2011  
Other Names
  
Legacy ER Project ID
50495  
Legacy GOLD ID
Gi0050495  
NCBI BioProject Name Bacillus azotoformans MEV2011
NCBI BioProject ID 209301
NCBI BioProject Accession PRJNA209301
NCBI Locus Tag
M670  
NCBI BioSample Accession SAMN02726830
PI Lars Schreiber
Added By Maja Nielsen on 2013-06-24
Last Modified By Mahrukh Mujeeb on 2017-07-07
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Aarhus University (Denmark)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX527326
Experiment Title Draft genome of Bacillus azotoformans MEV2011 (co-) denitrifying isolate from soil, 400bp library
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BacMEV2011_400bp
Library Layout SINGLE
Library Instrument ION_TORRENT_PGM
Spot Length 0
 
SRA Experiment Id SRX527325
Experiment Title Draft genome of Bacillus azotoformans MEV2011 (co-) denitrifying isolate from soil, 100bp library
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BacMEV2011_100bp
Library Layout SINGLE
Library Instrument ION_TORRENT_PGM
Spot Length 0
PROJECT COMPOSITION
Study Bacillus azotoformans MEV2011
Organism Bacillus azotoformans MEV2011
Analysis Projects Bacillus azotoformans MEV2011
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
Single Read  
Number Of Reads
2844800  
Read Size
  
Vector
  
GC Percent
38  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0043190
Organism Name
Bacillus azotoformans MEV2011  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Bacillus  
Genus Synonyms
  
Species
Bacillus azotoformans  
Subspecies
  
Species Synonyms
  
Strain
MEV2011  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1348973
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Bacillus  
NCBI Species
Bacillus azotoformans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
39-42  
Salinity
Halotolerant  
pH
4.0-9.0  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms Denitrifying
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?