PROJECT INFORMATION
GOLD Project ID
Gp0042582  
Project Name
Carnobacterium mobile MT37L, DSM 4848  
Other Names
  
Legacy ER Project ID
49205  
Legacy GOLD ID
Gi0049205  
NCBI BioProject Name Carnobacterium mobile DSM 4848 strain:MT37L
NCBI BioProject ID 234873
NCBI BioProject Accession PRJNA234873
NCBI Locus Tag
BR87  
NCBI BioSample Accession SAMN02786959
PI Wayne Nicholson
Added By JGI automated process on 2013-05-23
Last Modified By JGI automated process on 2014-09-10
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Comparative genomics of ten Carnobacterium species type strains plus two new Carnobacterium species isolated from Siberian permafrost and capable of growth at low pressure  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Comparative genomics of ten Carnobacterium species type strains plus two new Carnobacterium species isolated from Siberian permafrost and capable of growth at low pressure
Organism Carnobacterium mobile MT37L
Analysis Projects Carnobacterium mobile MT37L, DSM 4848
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Illumina HiSeq 2000
PacBio RS II
Library Method (MIGS-28)
PacBio >10kb w/ AMPure Bead Size Selection, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0042582
Organism Name
Carnobacterium mobile MT37L  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Carnobacterium  
Genus Synonyms
  
Species
Carnobacterium mobile  
Subspecies
  
Species Synonyms
  
Strain
MT37L  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 4848  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5495  
Exemplar Name
Carnobacterium mobile  
Taxon DOI
10.1601/tx.5495  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2750
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Carnobacteriaceae  
NCBI Genus
Carnobacterium  
NCBI Species
Carnobacterium mobile  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Poultry meat product
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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