PROJECT INFORMATION
GOLD Project ID
Gp0042494  
Project Name
Chitinibacter sp. ZOR0017  
Other Names
  
Legacy ER Project ID
49683  
Legacy GOLD ID
Gi0049683  
NCBI BioProject Name Chitinibacter sp. ZOR0017
NCBI BioProject ID 205591
NCBI BioProject Accession PRJNA205591
NCBI Locus Tag
L991  
NCBI BioSample Accession SAMN03021528
PI William Z. Stephens
Added By William Z. Stephens on 2013-05-29
Last Modified By Jyothi Mallajosyula on 2014-07-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Aquaculture
Model Organism
Sequencing Center University of Oregon
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome Sequencing of bacteria isolated from zebrafish intestine
Organism Chitinibacter sp. ZOR0017
Analysis Projects Chitinibacter sp. ZOR0017
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 5: Non-contiguous Finished
Finishing Goal Level 5: Non-contiguous Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
paired-end  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0042494
Organism Name
Chitinibacter sp. ZOR0017  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Chitinibacter  
Genus Synonyms
  
Species
Chitinibacter sp. ZOR0017  
Subspecies
  
Species Synonyms
  
Strain
ZOR0017  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1339254
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Neisseriales  
NCBI Family
Chromobacteriaceae  
NCBI Genus
Chitinibacter  
NCBI Species
Chitinibacter sp. ZOR0017  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Animal facility
Aquaculture
Animal gastrointestinal tract
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  
EXPERIMENT
Experimental Conditions
Aerobic, 30C, BHI  

 

 

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