PROJECT INFORMATION
GOLD Project ID
Gp0003951  
Project Name
Acholeplasma brassicae 0502  
Other Names
  
Legacy ER Project ID
13851  
Legacy GOLD ID
Gi03322, Gc0013851  
NCBI BioProject Name Abras_chr
NCBI BioProject ID 222672
NCBI BioProject Accession PRJEB1741
NCBI Locus Tag
BN853  
NCBI BioSample Accession
PI Kube M
Added By Nikos Kyrpides on 2008-07-31
Last Modified By Supratim Mukherjee on 2017-03-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center Max Planck Institute (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome analysis of a plant derived acholplasma (finished sequence quality, currated annotation, comparative analysis).  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Isolation
Taxonomy
Database
  
Genome Publications Journal of molecular microbiology and biotechnology 24(1):19-36 Analysis of the complete genomes of Acholeplasma brassicae, A. palmae and A. laidlawii and their comparison to the obligate parasites from 'Candidatus Phytoplasma'.
Other Publications
  
PROJECT COMPOSITION
Study Acholeplasma brassicae 0502
Organism Acholeplasma brassicae 0502
Analysis Projects Acholeplasma brassicae 0502
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003951
Organism Name
Acholeplasma brassicae 0502  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Acholeplasma  
Genus Synonyms
  
Species
Acholeplasma brassicae  
Subspecies
  
Species Synonyms
  
Strain
0502  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 49388  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4816  
Exemplar Name
Acholeplasma brassicae  
Taxon DOI
10.1601/tx.4816  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1318465
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Acholeplasmatales  
NCBI Family
Acholeplasmataceae  
NCBI Genus
Acholeplasma  
NCBI Species
Acholeplasma brassicae  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY538163
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Soil
Host
Wastewater
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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