PROJECT INFORMATION
GOLD Project ID
Gp0036827  
Project Name
Nocardiopsis kunsanensis DSM 44524  
Other Names
  
Legacy ER Project ID
42262  
Legacy GOLD ID
Gpto33183, Gi0042262  
NCBI BioProject Name Nocardiopsis kunsanensis DSM 44524
NCBI BioProject ID 178034
NCBI BioProject Accession PRJNA178034
NCBI Locus Tag
D456  
NCBI BioSample Accession SAMN02472160
PI Wen-Jun Li
Added By JGI automated process on 2013-03-06
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center Yunnan University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Genetic mechanisms of environmental adaptability. Nocardiopsis Kunsanensis is a moderate halophilic actinobacteria isolated from a saltern in Kunsan, Republic of Korea.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications 23626695
Other Publications
  
PROJECT COMPOSITION
Study Nocardiopsis kunsanensis DSM 44524
Organism Nocardiopsis kunsanensis DSM 44524
Analysis Projects Nocardiopsis kunsanensis DSM 44524
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
70  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036827
Organism Name
Nocardiopsis kunsanensis DSM 44524  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Nocardiopsis  
Genus Synonyms
  
Species
Nocardiopsis kunsanensis  
Subspecies
  
Species Synonyms
  
Strain
DSM 44524  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 44524  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7543  
Exemplar Name
Nocardiopsis kunsanensis  
Taxon DOI
10.1601/tx.7543  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1246445
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Streptosporangiales  
NCBI Family
Nocardiopsaceae  
NCBI Genus
Nocardiopsis  
NCBI Species
Nocardiopsis kunsanensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Salt crystallizer ponds  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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