PROJECT INFORMATION
GOLD Project ID
Gp0036824  
Project Name
Planctomycetaceae bacterium SCGC AC-711-E23  
Other Names
  
Legacy ER Project ID
42577  
Legacy GOLD ID
Gi0042577  
NCBI BioProject Name Planctomycetaceae bacterium SCGC AC-711-E23
NCBI BioProject ID 198544
NCBI BioProject Accession PRJNA198544
NCBI Locus Tag
K942  
NCBI BioSample Accession SAMN02744623
PI Ramunas Stepanauskas
Added By JGI automated process on 2013-03-18
Last Modified By JGI automated process on 2018-10-08
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Bigelow Laboratory Single Cell Genomics Center (SCGC) (USA)
DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid
  
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms
Organism Planctomycetaceae bacterium SCGC AC-711-E23
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Illumina HiSeq 2000
Illumina NextSeq-HO
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036824
Organism Name
Planctomycetaceae bacterium SCGC AC-711-E23  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
  
Genus Synonyms
  
Species
Planctomycetaceae bacterium SCGC AC-711-E23  
Subspecies
  
Species Synonyms
  
Strain
SCGC AC-711-E23  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Single Cell  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1325063
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Planctomycetia  
NCBI Order
Planctomycetales  
NCBI Family
Planctomycetaceae  
NCBI Genus
  
NCBI Species
Planctomycetaceae bacterium SCGC AC-711-E23  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?