PROJECT INFORMATION
GOLD Project ID
Gp0003590  
Project Name
Acinetobacter sp. ATCC 27244  
Other Names
  
Legacy ER Project ID
13178  
Legacy GOLD ID
Gi02599  
NCBI BioProject Name Acinetobacter sp. ATCC 27244
NCBI BioProject ID 30949
NCBI BioProject Accession PRJNA30949
NCBI Locus Tag
HMPREF0023  
NCBI BioSample Accession SAMN00000625
PI BCM-HGSC
Added By Heather Creasy on 2007-12-09
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Human Microbiome Project (HMP)
Medical
Sequencing Center Baylor College of Medicine
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
Reference genome for the Human Microbiome Project  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX001224
Experiment Title 454 sequencing of Acinetobacter sp. ATCC 27244 HMP0001 genomic fragment library
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 4WG_HMP0001.AUK1.01_000sA
Library Layout SINGLE
Library Instrument 454 GS 20
 
SRA Experiment Id SRX001108
Experiment Title Illumina sequencing of Acinetobacter sp. ATCC 27244 HMP0001 genomic fragment library
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name IWG_HMP0001.AUK1.01_000sA
Library Layout SINGLE
Library Instrument ILLUMINA_GENOME_ANALYZER
PROJECT COMPOSITION
Study Human Microbiome Project (HMP) Reference Genomes
Organism Acinetobacter sp. ATCC 27244
Analysis Projects Acinetobacter sp. ATCC 27244
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Sanger
Illumina
Library Method (MIGS-28)
  
Number Of Reads
565502  
Read Size
  
Vector
  
GC Percent
39  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0003590
Organism Name
Acinetobacter sp. ATCC 27244  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Acinetobacter  
Genus Synonyms
  
Species
Acinetobacter sp. ATCC 27244  
Subspecies
  
Species Synonyms
  
Strain
ATCC 27244  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 27244  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 525244
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Moraxellaceae  
NCBI Genus
Acinetobacter  
NCBI Species
Acinetobacter sp. ATCC 27244  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Diseases
  
Known Habitats Host
Human skin
Metabolisms
  
Phenotypes
  
Energy Sources
  
HMP METADATA
HMP ID
23  
Show in DACC?
Yes  
HMP Project Status
Complete  
BEI Status
  
NCBI Submission Status
6. annotation (and sequence) public on NCBI site  
Isolate Suggestion Source
  
HMP Isolation Body Sample Site
Skin  
HMP Isolation Body Sample Subsite
  
HMP Finishing Goal
  
Source, Sample & Medical Relevance Comments
  
Isolate Availability Comments
ATCC 27244  
Project Comments
  
DNA Received
Yes  
Date DNA Received
  
Date Sequencing Begins
2007-11-01  
Date Draft Sequencing Completed
2007-11-01  
Cross Reference ID
  

 

 

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