PROJECT INFORMATION
GOLD Project ID
Gp0035299  
Project Name
Hyphomonas polymorpha PS728  
Other Names
  
Legacy ER Project ID
40213  
Legacy GOLD ID
Gi23772  
NCBI BioProject Name Hyphomonas polymorpha PS728
NCBI BioProject ID 186172
NCBI BioProject Accession PRJNA186172
NCBI Locus Tag
HPO  
NCBI BioSample Accession SAMN02746694
PI
Added By JGI automated process on 2013-01-22
Last Modified By JGI automated process on 2014-10-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Third Institute of Oceanography, State Oceanic Administration (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Hyphomonas polymorpha PS728 Genome Sequencing.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Hyphomonas genome sequencing - The Third Institute of State Oceanic Administration (SOA), China
Organism Hyphomonas polymorpha PS728
Analysis Projects Hyphomonas polymorpha PS728
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0035299
Organism Name
Hyphomonas polymorpha PS728  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Hyphomonas  
Genus Synonyms
  
Species
Hyphomonas polymorpha  
Subspecies
  
Species Synonyms
  
Strain
PS728  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 2665  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1063  
Exemplar Name
Hyphomonas polymorpha  
Taxon DOI
10.1601/tx.1063  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1280954
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Hyphomonadaceae  
NCBI Genus
Hyphomonas  
NCBI Species
Hyphomonas polymorpha  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Nasopharyngeal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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