PROJECT INFORMATION
GOLD Project ID
Gp0034173  
Project Name
Acinetobacter junii CIP 107470  
Other Names
  
Legacy ER Project ID
39046  
Legacy GOLD ID
Gi22777  
NCBI BioProject Name Acinetobacter junii CIP 107470
NCBI BioProject ID 183291
NCBI BioProject Accession PRJNA183291
NCBI Locus Tag
F953  
NCBI BioSample Accession SAMN01087850
PI
Added By JGI automated process on 2012-12-17
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Acinetobacter Sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX236311
Experiment Title Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-119410' containing sample 'Acinetobacter grimontii CIP 107470'
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Solexa-119410
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
Spot Length 202
 
SRA Experiment Id SRX236343
Experiment Title Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-171295' containing sample 'Acinetobacter grimontii CIP 107470'
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Pond-171295
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
Spot Length 202
PROJECT COMPOSITION
Study Acinetobacter Sequencing- Broad Institute
Organism Acinetobacter junii CIP 107470
Analysis Projects Acinetobacter junii CIP 107470
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
38  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0034173
Organism Name
Acinetobacter junii CIP 107470  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Acinetobacter  
Genus Synonyms
  
Species
Acinetobacter junii  
Subspecies
  
Species Synonyms
  
Strain
CIP 107470  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CIP 107470  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2771  
Exemplar Name
Acinetobacter grimontii CIP 107470  
Taxon DOI
10.1601/tx.2771  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1217666
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Moraxellaceae  
NCBI Genus
Acinetobacter  
NCBI Species
Acinetobacter junii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?