PROJECT INFORMATION
GOLD Project ID
Gp0034063  
Project Name
Mycobacterium simiae ATCC 25275  
Other Names
  
Legacy ER Project ID
39123  
Legacy GOLD ID
Gi22854  
NCBI BioProject Name Mycobacterium simiae
NCBI BioProject ID 182593
NCBI BioProject Accession PRJEB1055
NCBI Locus Tag
  
NCBI BioSample Accession
PI
Added By JGI automated process on 2012-12-17
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center European Bioinformatics Institute (United Kingdom)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequence of Mycobacterium simiae  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Mycobacterium simiae ATCC 25275 = DSM 44165
Organism Mycobacterium simiae ATCC 25275
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0041871
Organism Name
Mycobacterium simiae ATCC 25275  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Mycobacterium  
Genus Synonyms
  
Species
Mycobacterium simiae  
Subspecies
  
Species Synonyms
  
Strain
ATCC 25275  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 25275  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.6402  
Exemplar Name
Mycobacterium simiae  
Taxon DOI
10.1601/tx.6402  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1236483
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Mycobacteriaceae  
NCBI Genus
Mycobacterium  
NCBI Species
Mycobacterium simiae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Soil
Host
Monkey
Human
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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