PROJECT NAME
GOLD Project ID
Gp0034039  
Project Name
Pseudothermotoga hypogea, DSM 11164  
Other Names
Thermotoga hypogea, DSM 11164  
Legacy ER Project ID
39152  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID 106472
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Kesen Ma
Added By Tina Suen on 2012-12-19
Last Modified By Supratim Mukherjee on 2017-03-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid
  
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center McGill University (Canada)
Genome Quebec (Canada)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study MGCB2
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status DNA Received
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
454 Paired-end  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014139
Organism Name
Pseudothermotoga hypogea DSM 11164  
Other names (alias, synonyms, short names, common names)
Thermotoga hypogea DSM 11164  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Pseudothermotoga  
Genus Synonyms
Thermotoga  
Species
Pseudothermotoga hypogea  
Subspecies
  
Species Synonyms
  
Strain
DSM 11164  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 11164  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.462  
Exemplar Name
Thermotoga hypogea  
Taxon DOI
10.1601/tx.462  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1123384
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Thermotogales  
NCBI Family
Thermotogaceae  
NCBI Genus
Pseudothermotoga  
NCBI Species
Pseudothermotoga hypogea  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Oil reservoir  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Oil fields
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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