PROJECT INFORMATION
GOLD Project ID
Gp0323682  
Project Name
Microbulbifer mangrovi DD-13  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Microbulbifer mangrovi DD-13 genome sequencing
NCBI BioProject ID 324768
NCBI BioProject Accession PRJNA324768
NCBI Locus Tag
B4U49  
NCBI BioSample Accession SAMN05214359
PI
Added By JGI automated process on 2018-07-12
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Goa University
Collaborating Institute
  
Funding Agency
  
Project Description
Microbulbifer mangrovi DD-13 genome sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Mar. Biotechnol. 19(1):116-124 Genome Sequence of Microbulbifer mangrovi DD-13 Reveals Its Versatility to Degrade Multiple Polysaccharides.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Microbulbifer mangrovi DD-13 genome sequencing
Organism Microbulbifer mangrovi DD-13
Analysis Projects Microbulbifer mangrovi DD-13
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NextSeq 500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0455355
Organism Name
Microbulbifer mangrovi DD-13  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Microbulbifer  
Genus Synonyms
  
Species
Microbulbifer mangrovi  
Subspecies
  
Species Synonyms
  
Strain
DD-13  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
10.1601/ex.24343  
Exemplar Name
Microbulbifer mangrovi  
Taxon DOI
10.1601/tx.24343  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 927787
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Cellvibrionales  
NCBI Family
Microbulbiferaceae  
NCBI Genus
Microbulbifer  
NCBI Species
Microbulbifer mangrovi  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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