PROJECT INFORMATION
GOLD Project ID
Gp0322644  
Project Name
Methanosphaera cuniculi 1R-7  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Methanosphaera cuniculi 1R-7 genome sequencing
NCBI BioProject ID 300716
NCBI BioProject Accession PRJNA300716
NCBI Locus Tag
  
NCBI BioSample Accession SAMN04229037
PI
Added By JGI automated process on 2018-07-12
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of California, Santa Barbara
Collaborating Institute
  
Funding Agency
  
Project Description
Methanosphaera cuniculi 1R-7 genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics 18(1):639 Genomic analysis of methanogenic archaea reveals a shift towards energy conservation.
Other Publications
  
PROJECT COMPOSITION
Study Methanosphaera cuniculi 1R-7 genome sequencing
Organism Methanosphaera cuniculi 1R-7
Analysis Projects Methanosphaera cuniculi 1R-7
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0324337
Organism Name
Methanosphaera cuniculi 1R-7  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOBACTERIA  
Genus
Methanosphaera  
Genus Synonyms
  
Species
Methanosphaera cuniculi  
Subspecies
  
Species Synonyms
  
Strain
1R-7  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 4103  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.131  
Exemplar Name
Methanosphaera cuniculi  
Taxon DOI
10.1601/tx.131  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1077256
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanobacteria  
NCBI Order
Methanobacteriales  
NCBI Family
Methanobacteriaceae  
NCBI Genus
Methanosphaera  
NCBI Species
Methanosphaera cuniculi  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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