PROJECT INFORMATION
GOLD Project ID
Gp0316081  
Project Name
Acidovorax avenae avenae MOR  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Acidovorax avenae avenae MOR genome sequencing
NCBI BioProject ID 340882
NCBI BioProject Accession PRJNA340882
NCBI Locus Tag
C8236  
NCBI BioSample Accession SAMN05714664
PI
Added By JGI automated process on 2018-05-24
Last Modified By JGI automated process on 2018-05-25
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center Michigan State University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Acidovorax avenae subsp. avenae causing disease on turf  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Molecular plant-microbe interactions : MPMI 30(10):813-828 Recombination of Virulence Genes in Divergent Acidovorax avenae Strains That Infect a Common Host.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Acidovorax avenae avenae genome sequencing
Organism Acidovorax avenae avenae MOR
Analysis Projects Acidovorax avenae avenae MOR
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0451661
Organism Name
Acidovorax avenae avenae MOR  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Acidovorax  
Genus Synonyms
  
Species
Acidovorax avenae  
Subspecies
avenae  
Species Synonyms
  
Strain
MOR  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 80870
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Comamonadaceae  
NCBI Genus
Acidovorax  
NCBI Species
Acidovorax avenae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Leaf  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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