PROJECT INFORMATION
GOLD Project ID
Gp0309798  
Project Name
Elizabethkingia anophelis FDAARGOS_134  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing as part of FDA-ARGOS: dAtabase for Regulatory Grade micrObial Sequences project
NCBI BioProject ID 231221
NCBI BioProject Accession PRJNA231221
NCBI Locus Tag
  
NCBI BioSample Accession SAMN03996278
PI
Added By JGI automated process on 2018-04-26
Last Modified By JGI automated process on 2018-04-30
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center Institute for Genome Sciences, University of Maryland School of Medicine (USA)
US Food and Drug Administration
Collaborating Institute
  
Funding Agency
  
Project Description
Elizabethkingia anophelis FDAARGOS_134 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1384663  (Link to NCBI )
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name PL100045865-1
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX1384664  (Link to NCBI )
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name PL100045865-1
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX1384665  (Link to NCBI )
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name IL100047549
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Genome sequencing as part of FDA-ARGOS: dAtabase for Regulatory Grade micrObial Sequences project
Organism Elizabethkingia anophelis FDAARGOS_134
Analysis Projects Elizabethkingia anophelis FDAARGOS_134
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0416698
Organism Name
Elizabethkingia anophelis FDAARGOS_134  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Elizabethkingia  
Genus Synonyms
  
Species
Elizabethkingia anophelis  
Subspecies
  
Species Synonyms
  
Strain
FDAARGOS_134  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
FDAARGOS_134  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1117645
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Elizabethkingia  
NCBI Species
Elizabethkingia anophelis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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