PROJECT INFORMATION
GOLD Project ID
Gp0290545  
Project Name
Methanobrevibacter gottschalkii DSM 11977  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Methanobrevibacter gottschalkii DSM 11977
NCBI BioProject ID 500326
NCBI BioProject Accession PRJNA500326
NCBI Locus Tag
EDC42  
NCBI BioSample Accession SAMN10363317
PI Markus Göker
Added By JGI automated process on 2017-12-21
Last Modified By JGI automated process on 2019-06-17
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genome sequencing as part of The One Thousand Microbial Genomes Phase 4 (KMG IV) project  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5202802
Experiment Title Methanobrevibacter gottschalkii DSM 11977
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name CTOSU
Library Layout PAIRED
PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the most valuable type-strain genomes for metagenomic binning, comparative biology and taxonomic classification
Organism Methanobrevibacter gottschalkii DSM 11977
Analysis Projects Methanobrevibacter gottschalkii DSM 11977
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013041
Organism Name
Methanobrevibacter gottschalkii DSM 11977  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOBACTERIA  
Genus
Methanobrevibacter  
Genus Synonyms
  
Species
Methanobrevibacter gottschalkii  
Subspecies
  
Species Synonyms
  
Strain
DSM 11977  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 11977  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.123  
Exemplar Name
Methanobrevibacter gottschalkii  
Taxon DOI
10.1601/tx.123  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 190974
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanobacteria  
NCBI Order
Methanobacteriales  
NCBI Family
Methanobacteriaceae  
NCBI Genus
Methanobrevibacter  
NCBI Species
Methanobrevibacter gottschalkii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 162964
Genbank 16S ID U55238
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
37 C  
Salinity
  
pH
  
Cell Diameter
0.7 um  
Cell Length
0.9 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Chains
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes Catalase negative
Energy Sources
  

 

 

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