PROJECT INFORMATION
GOLD Project ID
Gp0260527  
Project Name
Turicimonas muris YL45  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Turicimonas muris YL45
NCBI BioProject ID 289613
NCBI BioProject Accession PRJNA289613
NCBI Locus Tag
  
NCBI BioSample Accession SAMN03856237
PI
Added By JGI automated process on 2017-11-09
Last Modified By Hema Katta on 2018-08-13
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Model Organism
Sequencing Center Max von Pettenkofer-Institute (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Turicimonas muris YL45  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1092361
Experiment Title Genome sequencing of a defined mouse intestinal bacterial community
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Genome sequencing and assembly of a defined mouse intestinal bacterial community
Organism Turicimonas muris YL45
Analysis Projects Turicimonas muris YL45
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0396135
Organism Name
Turicimonas muris YL45  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Turicimonas  
Genus Synonyms
  
Species
Turicimonas muris  
Subspecies
  
Species Synonyms
  
Strain
YL45  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
10.1601/ex.29408  
Exemplar Name
Turicimonas muris  
Taxon DOI
10.1601/tx.29408  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1796652
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Sutterellaceae  
NCBI Genus
Turicimonas  
NCBI Species
Turicimonas muris  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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