PROJECT INFORMATION
GOLD Project ID
Gp0025110  
Project Name
Vibrio campbellii CAIM 519  
Other Names
  
Legacy ER Project ID
30524  
Legacy GOLD ID
Gi21224  
NCBI BioProject Name Vibrio campbellii CAIM 519 = NBRC 15631
NCBI BioProject ID 173088
NCBI BioProject Accession PRJNA173088
NCBI Locus Tag
B878  
NCBI BioSample Accession SAMN02469609
PI
Added By JGI automated process on 2012-10-01
Last Modified By JGI automated process on 2014-10-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Center for Food Research and Development (CIAD) (Mexico)
Collaborating Institute
  
Funding Agency
  
Project Description
The core group or Harveyi clade of Vibrio is composed of several closely related species. The type strain of V. campbellii CAIM 519T will be used for phylogenomic studies.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Vibrio campbellii CAIM 519
Organism Vibrio campbellii CAIM 519
Analysis Projects Vibrio campbellii CAIM 519
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0043199
Organism Name
Vibrio campbellii CAIM 519  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio campbellii  
Subspecies
  
Species Synonyms
  
Strain
CAIM 519  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CAIM 519  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.2956  
Exemplar Name
Vibrio campbellii  
Taxon DOI
10.1601/tx.2956  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1224742
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio campbellii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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