| PROJECT INFORMATION | |
|---|---|
GOLD Project ID
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Gp0025041
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Project Name
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Micrococcus luteus modasa
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Other Names
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Legacy ER Project ID
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30500
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Legacy GOLD ID
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Gi21200
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| NCBI BioProject Name | Micrococcus luteus str. modasa |
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NCBI BioProject ID
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175355 |
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NCBI BioProject Accession
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PRJNA175355 |
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NCBI Locus Tag
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C653
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NCBI BioSample Accession
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SAMN01178441 |
| PI | |
| Added By |
JGI automated process
on 2012-10-01 |
| Last Modified By |
JGI automated process
on 2014-08-18 |
| Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Bioremediation |
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Sequencing Center
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Xcelris Genomics
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Collaborating Institute
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Funding Agency
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Project Description
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Micrococcus are Gram-positive cocci that are 0.5 to 3.5 micrometers in diameter and usually arranged in tetrads or irregular clusters. The bacteria is useful for bioremediation. Isolated from contaminated soil from modasa north Gujarat, India.
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Project Information Visibility
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Public |
| PROJECT TYPE | |
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Specimen
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Organism |
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Nucleic Acid
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DNA |
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Sequencing Strategy
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Whole Genome Sequencing
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| EXTERNAL PROJECT LINKS | |
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Project Information
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Database
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Genome Publications
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Genome announcements
1(2):e0007613
Whole-Genome Sequencing of Micrococcus luteus Strain Modasa, of Indian Origin.
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Other Publications
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| PROJECT COMPOSITION | |
| Study |
Micrococcus luteus modasa |
| Organism |
Micrococcus luteus modasa |
| Analysis Projects |
Micrococcus luteus modasa |
| Number of Analysis Projects |
1 |
| Number of DAPs |
0
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| SEQUENCING INFORMATION | |
|---|---|
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Sequencing Status
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Complete |
| Sequencing Quality (MIGS-31) |
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Finishing Goal
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Sequencing Comments
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Sequencing Technology
(MIGS-29)
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Ion Torrent PGM |
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Library Method
(MIGS-28)
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Number Of Reads
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Read Size
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Vector
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| GC Percent |
73
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| Chromosome Count |
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| Plasmid Count |
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| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0025041 |
| Organism Name |
Micrococcus luteus modasa
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| Other names (alias, synonyms, short names, common names) |
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| Organism Domain |
BACTERIAL
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| Phylogeny |
ACTINOBACTERIA
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| Genus |
Micrococcus
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| Genus Synonyms |
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| Species |
Micrococcus luteus
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| Subspecies |
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| Species Synonyms |
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| Strain |
modasa
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| Strain Synonyms |
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| Serovar-Biovar |
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| Culture Collection ID |
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| Type Strain |
Unknown
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| Exemplar DOI |
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| Exemplar Name |
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| Taxon DOI |
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| Biosafety Level |
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| Organism Comments |
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| Cultured |
Yes
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| Culture Type |
Isolate
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| Organism Type |
Natural
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| Uncultured Type |
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| Commercial Strain |
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| Commercial Strain Comments |
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ORGANISM TAXONOMY
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| NCBI Taxonomy ID |
1232675 |
| NCBI Superkingdom |
Bacteria
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| NCBI Kingdom |
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| NCBI Phylum |
Actinobacteria
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| NCBI Class |
Actinobacteria
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| NCBI Order |
Micrococcales
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| NCBI Family |
Micrococcaceae
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| NCBI Genus |
Micrococcus
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| NCBI Species |
Micrococcus luteus
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| ISOLATION CLASSIFICATION | |
| Ecosystem |
Environmental
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| Ecosystem Category |
Terrestrial
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| Ecosystem Type |
Soil
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| Ecosystem Subtype |
Unclassified
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| Specific Ecosystem |
Contaminated
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| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
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| Genbank 16S ID |
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| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
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| Cell Shape |
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| Motility |
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| Sporulation |
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| Temperature Range |
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| Temperature Optimum |
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| Salinity |
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| pH |
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| Cell Diameter |
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| Cell Length |
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| Color |
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| Gram Staining |
Gram+
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| Biotic Relationships |
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| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Symbiont Name |
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| Symbiont Taxon ID |
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| Cell Arrangements |
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| Diseases |
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| Known Habitats |
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| Metabolisms |
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| Phenotypes |
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| Energy Sources |
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| CYANOBACTERIA METADATA | |
| Filaments |
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| Filament Type |
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| Differentiated Cells |
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| Position Of Heterocysts |
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| Cysts |
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| Mode Of Reproduction |
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| Trichome |
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| Trichome Type |
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| Carotenoids |
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| Pigments |
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| Phage Infectivity |
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| Phage Type |
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| Restriction Enzyme |
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| Toxin Production |
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| Toxin Type |
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| Secondary Metabolites |
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| Developmental Cycle |
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| Branching |
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| Gas Vesicles |
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| Gas Vesicle Type |
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| Diagnostic Inclusion Body Information |
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| Extracellular Structures |
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| Bloom Forming |
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| Pigment Type |
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| Complementary chromatic adaptation (CCA) |
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| Medium Types |
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