PROJECT INFORMATION
GOLD Project ID
Gp0024882  
Project Name
Bacillus amyloliquefaciens UCMB-5140  
Other Names
  
Legacy ER Project ID
30619  
Legacy GOLD ID
Gi21366  
NCBI BioProject Name Bacillus amyloliquefaciens UCMB5140
NCBI BioProject ID 176688
NCBI BioProject Accession PRJNA176688
NCBI Locus Tag
D070  
NCBI BioSample Accession
PI Oleg Reva
Added By Tatiparthi Reddy on 2012-10-10
Last Modified By Tatiparthi Reddy on 2012-10-23
Project Comments
  
Project Status
incomplete  
Project Relevance Comparative analysis
Sequencing Center University of Pretoria
Collaborating Institute
  
Funding Agency
  
Project Description
This bacterium suppresses growth of many bacterial pathogens, including Pseudomonas aeruginosa, which usually is resistant to anatgonostic activity of Bacillus-antagonists. It is considered to be prospective for development of new probiotics. Another name of this strain was Bacillus subtilis 51.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Bacillus amyloliquefaciens UCMB-5140
Organism Bacillus amyloliquefaciens UCMB-5140
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0024882
Organism Name
Bacillus amyloliquefaciens UCMB-5140  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Bacillus  
Genus Synonyms
  
Species
Bacillus amyloliquefaciens  
Subspecies
  
Species Synonyms
  
Strain
UCMB-5140  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1423
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Bacillus  
NCBI Species
Bacillus subtilis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Bean-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
Blue-green  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
Endosymbiotic extracellular  
Symbiotic Relationship
Commensal  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes Antimicrobial activities
Energy Sources Heterotroph

 

 

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