PROJECT INFORMATION
GOLD Project ID
Gp0023655  
Project Name
Actinomadura hibisca NBRC 15177  
Other Names
  
Legacy ER Project ID
28922  
Legacy GOLD ID
Gi20882  
NCBI BioProject Name Actinomadura hibisca NBRC 15177
NCBI BioProject ID 172576
NCBI BioProject Accession PRJDB377
NCBI Locus Tag
AH6  
NCBI BioSample Accession SAMD00046515
PI
Added By JGI automated process on 2012-08-29
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Comparative genomics of Actinomadura isolates  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Actinomadura hibisca NBRC 15177
Organism Actinomadura hibisca NBRC 15177
Analysis Projects Actinomadura hibisca NBRC 15177
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0023655
Organism Name
Actinomadura hibisca NBRC 15177  
Other names (alias, synonyms, short names, common names)
Actinomadura hibisca P157-2  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Actinomadura  
Genus Synonyms
  
Species
Actinomadura hibisca  
Subspecies
  
Species Synonyms
  
Strain
P157-2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NBRC 15177  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7596  
Exemplar Name
Actinomadura hibisca  
Taxon DOI
10.1601/tx.7596  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1220559
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Streptosporangiales  
NCBI Family
Thermomonosporaceae  
NCBI Genus
Actinomadura  
NCBI Species
Actinomadura hibisca  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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