PROJECT INFORMATION
GOLD Project ID
Gp0023463  
Project Name
Salmonella enterica enterica sv. Enteritidis 50-3079  
Other Names
  
Legacy ER Project ID
27910  
Legacy GOLD ID
Gi19924  
NCBI BioProject Name Salmonella enterica subsp. enterica serovar Enteritidis str. 50-3079
NCBI BioProject ID 73685
NCBI BioProject Accession PRJNA73685
NCBI Locus Tag
SEEE3079  
NCBI BioSample Accession SAMN01041094
PI
Added By JGI automated process on 2012-07-30
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center U.S. Food and Drug Administration (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(21):5994-5 Draft genome sequences of 21 Salmonella enterica serovar enteritidis strains.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX157876
Experiment Title Whole genome sequencing of Salmonella Enteritidis str. 50-3079 by 454 GS FLX
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Salmonella Enteritidis str. 50-3079 shotgun
Library Layout SINGLE
Library Instrument 454 GS FLX Titanium
PROJECT COMPOSITION
Study Salmonella enterica enterica serovar Enteritidis str. 50-3079
Organism Salmonella enterica enterica sv. Enteritidis 50-3079
Analysis Projects Salmonella enterica enterica sv. Enteritidis 50-3079
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0023463
Organism Name
Salmonella enterica enterica sv. Enteritidis 50-3079  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Salmonella  
Genus Synonyms
  
Species
Salmonella enterica  
Subspecies
enterica  
Species Synonyms
  
Strain
50-3079  
Strain Synonyms
  
Serovar/Cultivar
Enteritidis  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1090945
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Salmonella  
NCBI Species
Salmonella enterica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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