PROJECT INFORMATION
GOLD Project ID
Gp0234158  
Project Name
Kosmotoga olearia TBF19.5.1 - KO77.1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Kosmotoga olearia TBF19.5.1 - KO77.1
NCBI BioProject ID 426741
NCBI BioProject Accession PRJNA426741
NCBI Locus Tag
  
NCBI BioSample Accession SAMN08220193
PI Olga Zhaxybayeva
Added By JGI automated process on 2017-08-25
Last Modified By JGI automated process on 2018-10-08
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Methylation detection to identify genomic determinants of the adaptation of an oil-dwelling bacterium Kosmotoga olearia to growth at 77C.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Methylation  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genomic determinants of the adaptation of an oil-dwelling bacterium Kosmotoga olearia to a wide range of growth temperature
Organism Kosmotoga olearia TBF19.5.1
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
42  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0088934
Organism Name
Kosmotoga olearia TBF19.5.1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Kosmotoga  
Genus Synonyms
  
Species
Kosmotoga olearia  
Subspecies
  
Species Synonyms
  
Strain
TBF19.5.1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14942  
Exemplar Name
Kosmotoga olearia  
Taxon DOI
10.1601/tx.14942  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 651457
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Kosmotogales  
NCBI Family
Kosmotogaceae  
NCBI Genus
Kosmotoga  
NCBI Species
Kosmotoga olearia  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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