PROJECT INFORMATION
GOLD Project ID
Gp0002302  
Project Name
Halobiforma lacisalsi AJ5, JCM 12983  
Other Names
  
Legacy ER Project ID
12196  
Legacy GOLD ID
Gi01397  
NCBI BioProject Name Halobiforma lacisalsi AJ5
NCBI BioProject ID 16192
NCBI BioProject Accession PRJNA16192
NCBI Locus Tag
CHINAEXTREME  
NCBI BioSample Accession SAMN02470038
PI Min Wu
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center Zhejiang University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Extremely halophilic archaeal  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Isolation
Database
  
Genome Publications Journal of bacteriology 193(24):7023-4 Genome sequence of Halobiforma lacisalsi AJ5, an extremely halophilic archaeon which harbors a bop gene.
Other Publications
  
PROJECT COMPOSITION
Study Halobiforma lacisalsi AJ5, JCM 12983
Organism Halobiforma lacisalsi AJ5, JCM 12983
Analysis Projects Halobiforma lacisalsi AJ5, JCM 12983
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
65  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0002302
Organism Name
Halobiforma lacisalsi AJ5, JCM 12983  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halobiforma  
Genus Synonyms
  
Species
Halobiforma lacisalsi  
Subspecies
  
Species Synonyms
  
Strain
AJ5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CGMCC 1.3738  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9565  
Exemplar Name
Halobiforma lacisalsi  
Taxon DOI
10.1601/tx.9565  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 358396
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Natrialbales  
NCBI Family
Natrialbaceae  
NCBI Genus
Halobiforma  
NCBI Species
Halobiforma lacisalsi  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY277582
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes Neutrophilic
Energy Sources
  

 

 

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